Package org.bytedeco.hdf5

Class DataSet

java.lang.Object

org.bytedeco.javacpp.Pointer

org.bytedeco.hdf5.IdComponent

org.bytedeco.hdf5.H5Location

org.bytedeco.hdf5.H5Object

org.bytedeco.hdf5.DataSet

All Implemented Interfaces:

AutoCloseable

@Namespace("H5")
@NoOffset
@Properties(inherit=hdf5.class)
public class DataSet
extends H5Object

\class DataSet \brief Class DataSet operates on HDF5 datasets.

An datasets has many characteristics similar to an attribute, thus both Attribute and DataSet are derivatives of AbstractDs. DataSet also inherits from H5Object because a dataset is an HDF5 object.

Nested Class Summary

Nested classes/interfaces inherited from class org.bytedeco.javacpp.Pointer

Pointer.CustomDeallocator, Pointer.Deallocator, Pointer.NativeDeallocator, Pointer.ReferenceCounter

Field Summary

Fields inherited from class org.bytedeco.javacpp.Pointer

address, capacity, limit, position

Constructor Summary

Constructors

Constructor	Description
DataSet()
DataSet(long existing_id)
DataSet(Attribute attr, Pointer ref)
DataSet(Attribute attr, Pointer ref, int ref_type, PropList plist)
DataSet(DataSet original)
DataSet(H5Location loc, Pointer ref)
DataSet(H5Location loc, Pointer ref, int ref_type, PropList plist)
DataSet(Pointer p)	Pointer cast constructor.

Method Summary

Modifier and Type	Method	Description
void	_close()
AbstractDs	asAbstractDs()
static AbstractDs	asAbstractDs(DataSet pointer)
void	extend(long... size)
void	extend(LongBuffer size)
void	extend(LongPointer size)
void	fillMemBuf(Pointer buf, DataType buf_type, DataSpace space)
void	fillMemBuf(Pointer _fill, DataType fill_type, Pointer buf, DataType buf_type, DataSpace space)
BytePointer	fromClass()	\brief Returns this class name.
DSetAccPropList	getAccessPlist()
DSetCreatPropList	getCreatePlist()
long	getId()
long	getInMemDataSize()
long	getOffset()
DataSpace	getSpace()
void	getSpaceStatus(int[] status)
void	getSpaceStatus(IntBuffer status)
void	getSpaceStatus(IntPointer status)
long	getStorageSize()
long	getVlenBufSize(DataType type, DataSpace space)
int	iterateElems(Pointer buf, DataType type, DataSpace space, H5D_operator_t op)
int	iterateElems(Pointer buf, DataType type, DataSpace space, H5D_operator_t op, Pointer op_data)
DataSet	put(DataSet original)
void	read(BytePointer buf, DataType mem_type)
void	read(BytePointer buf, DataType mem_type, DataSpace mem_space, DataSpace file_space, DSetMemXferPropList xfer_plist)
void	read(Pointer buf, DataType mem_type)
void	read(Pointer buf, DataType mem_type, DataSpace mem_space, DataSpace file_space, DSetMemXferPropList xfer_plist)
static void	vlenReclaim(DataType type, DataSpace space, DSetMemXferPropList xfer_plist, Pointer buf)
static void	vlenReclaim(Pointer buf, DataType type)
static void	vlenReclaim(Pointer buf, DataType type, DataSpace space, DSetMemXferPropList xfer_plist)
void	write(String buf, DataType mem_type)
void	write(String buf, DataType mem_type, DataSpace mem_space, DataSpace file_space, DSetMemXferPropList xfer_plist)
void	write(BytePointer buf, DataType mem_type)
void	write(BytePointer buf, DataType mem_type, DataSpace mem_space, DataSpace file_space, DSetMemXferPropList xfer_plist)
void	write(Pointer buf, DataType mem_type)
void	write(Pointer buf, DataType mem_type, DataSpace mem_space, DataSpace file_space, DSetMemXferPropList xfer_plist)

Methods inherited from class org.bytedeco.hdf5.H5Object

attrExists, attrExists, createAttribute, createAttribute, createAttribute, createAttribute, getNumAttrs, getObjName, getObjName, getObjName, getObjName, getObjName, getObjName, getObjName, iterateAttrs, iterateAttrs, iterateAttrs, iterateAttrs, objVersion, openAttribute, openAttribute, openAttribute, removeAttr, removeAttr, renameAttr, renameAttr, visit

Methods inherited from class org.bytedeco.hdf5.H5Location

childObjType, childObjType, childObjType, childObjType, childObjType, childObjVersion, childObjVersion, copyLink, copyLink, copyLink, copyLink, copyLink, copyLink, copyLink, copyLink, createDataSet, createDataSet, createDataSet, createDataSet, createGroup, createGroup, createGroup, createGroup, createGroup, createGroup, dereference, dereference, exists, exists, exists, exists, flush, getComment, getComment, getComment, getComment, getComment, getComment, getComment, getComment, getComment, getComment, getFileName, getLinkInfo, getLinkInfo, getLinkInfo, getLinkInfo, getLinkval, getLinkval, getLinkval, getLinkval, getNativeObjinfo, getNativeObjinfo, getNativeObjinfo, getNativeObjinfo, getNativeObjinfo, getNativeObjinfo, getNativeObjinfo, getNativeObjinfo, getNativeObjinfo, getNativeObjinfo, getNumObjs, getObjinfo, getObjinfo, getObjinfo, getObjinfo, getObjinfo, getObjinfo, getObjinfo, getObjinfo, getObjinfo, getObjinfo, getObjnameByIdx, getObjnameByIdx, getObjnameByIdx, getObjnameByIdx, getRefObjType, getRefObjType, getRegion, getRegion, link, link, link, link, link, link, link, link, link, link, link, link, link, link, mount, mount, move, move, moveLink, moveLink, moveLink, moveLink, moveLink, moveLink, moveLink, moveLink, nameExists, nameExists, nameExists, nameExists, openDataSet, openDataSet, openDataSet, openDataSet, openGroup, openGroup, reference, reference, reference, reference, reference, reference, reference, reference, removeComment, removeComment, setComment, setComment, setComment, setComment, throwException, throwException, unlink, unlink, unlink, unlink, unmount, unmount

Methods inherited from class org.bytedeco.hdf5.IdComponent

decRefCount, decRefCount, getCounter, getCounter, getHDFObjType, getHDFObjType, getNumMembers, incRefCount, incRefCount, inMemFunc, inMemFunc, isValid, put, setId, typeExists

Methods inherited from class org.bytedeco.javacpp.Pointer

address, asBuffer, asByteBuffer, availablePhysicalBytes, calloc, capacity, capacity, close, deallocate, deallocate, deallocateReferences, deallocator, deallocator, equals, fill, formatBytes, free, getDirectBufferAddress, getPointer, getPointer, getPointer, getPointer, hashCode, interruptDeallocatorThread, isNull, isNull, limit, limit, malloc, maxBytes, maxPhysicalBytes, memchr, memcmp, memcpy, memmove, memset, offsetAddress, offsetof, offsetof, parseBytes, physicalBytes, physicalBytesInaccurate, position, position, put, realloc, referenceCount, releaseReference, retainReference, setNull, sizeof, sizeof, toString, totalBytes, totalCount, totalPhysicalBytes, withDeallocator, zero

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

DataSet

public DataSet(Pointer p)

Pointer cast constructor. Invokes Pointer(Pointer).

DataSet

public DataSet(@Const @ByRef
               H5Location loc,
               @Const
               Pointer ref,
               @Cast("H5R_type_t")
               int ref_type,
               @Const @ByRef(nullValue="H5::PropList::DEFAULT")
               PropList plist)

DataSet

public DataSet(@Const @ByRef
               H5Location loc,
               @Const
               Pointer ref)

DataSet

public DataSet(@Const @ByRef
               Attribute attr,
               @Const
               Pointer ref,
               @Cast("H5R_type_t")
               int ref_type,
               @Const @ByRef(nullValue="H5::PropList::DEFAULT")
               PropList plist)

DataSet

public DataSet(@Const @ByRef
               Attribute attr,
               @Const
               Pointer ref)

DataSet

public DataSet()

DataSet

public DataSet(@Const @ByRef
               DataSet original)

DataSet

public DataSet(@Cast("const hid_t")
               long existing_id)

Method Detail

asAbstractDs

public AbstractDs asAbstractDs()

asAbstractDs

@Namespace
@Name("static_cast<H5::AbstractDs*>")
public static AbstractDs asAbstractDs(DataSet pointer)

_close

@Name("close")
public void _close()

Overrides:

_close in class IdComponent

extend

public void extend(@Cast("const hsize_t*")
                   LongPointer size)

extend

public void extend(@Cast("const hsize_t*")
                   LongBuffer size)

extend

public void extend(@Cast("const hsize_t*")
                   long... size)

fillMemBuf

public void fillMemBuf(@Const
                       Pointer _fill,
                       @Const @ByRef
                       DataType fill_type,
                       Pointer buf,
                       @Const @ByRef
                       DataType buf_type,
                       @Const @ByRef
                       DataSpace space)

fillMemBuf

public void fillMemBuf(Pointer buf,
                       @Const @ByRef
                       DataType buf_type,
                       @Const @ByRef
                       DataSpace space)

getCreatePlist

@ByVal
public DSetCreatPropList getCreatePlist()

getAccessPlist

@ByVal
public DSetAccPropList getAccessPlist()

getOffset

@Cast("haddr_t")
public long getOffset()

getSpace

@ByVal
public DataSpace getSpace()

getSpaceStatus

public void getSpaceStatus(@Cast("H5D_space_status_t*") @ByRef
                           IntPointer status)

getSpaceStatus

public void getSpaceStatus(@Cast("H5D_space_status_t*") @ByRef
                           IntBuffer status)

getSpaceStatus

public void getSpaceStatus(@Cast("H5D_space_status_t*") @ByRef
                           int[] status)

getStorageSize

@Cast("hsize_t")
public long getStorageSize()

getInMemDataSize

@Cast("size_t")
public long getInMemDataSize()

getVlenBufSize

@Cast("hsize_t")
public long getVlenBufSize(@Const @ByRef
                           DataType type,
                           @Const @ByRef
                           DataSpace space)

vlenReclaim

public static void vlenReclaim(@Const @ByRef
                               DataType type,
                               @Const @ByRef
                               DataSpace space,
                               @Const @ByRef
                               DSetMemXferPropList xfer_plist,
                               Pointer buf)

vlenReclaim

public static void vlenReclaim(Pointer buf,
                               @Const @ByRef
                               DataType type,
                               @Const @ByRef(nullValue="H5::DataSpace::ALL")
                               DataSpace space,
                               @Const @ByRef(nullValue="H5::DSetMemXferPropList::DEFAULT")
                               DSetMemXferPropList xfer_plist)

vlenReclaim

public static void vlenReclaim(Pointer buf,
                               @Const @ByRef
                               DataType type)

read

public void read(Pointer buf,
                 @Const @ByRef
                 DataType mem_type,
                 @Const @ByRef(nullValue="H5::DataSpace::ALL")
                 DataSpace mem_space,
                 @Const @ByRef(nullValue="H5::DataSpace::ALL")
                 DataSpace file_space,
                 @Const @ByRef(nullValue="H5::DSetMemXferPropList::DEFAULT")
                 DSetMemXferPropList xfer_plist)

read

public void read(Pointer buf,
                 @Const @ByRef
                 DataType mem_type)

read

public void read(@StdString @ByRef
                 BytePointer buf,
                 @Const @ByRef
                 DataType mem_type,
                 @Const @ByRef(nullValue="H5::DataSpace::ALL")
                 DataSpace mem_space,
                 @Const @ByRef(nullValue="H5::DataSpace::ALL")
                 DataSpace file_space,
                 @Const @ByRef(nullValue="H5::DSetMemXferPropList::DEFAULT")
                 DSetMemXferPropList xfer_plist)

read

public void read(@StdString @ByRef
                 BytePointer buf,
                 @Const @ByRef
                 DataType mem_type)

write

public void write(@Const
                  Pointer buf,
                  @Const @ByRef
                  DataType mem_type,
                  @Const @ByRef(nullValue="H5::DataSpace::ALL")
                  DataSpace mem_space,
                  @Const @ByRef(nullValue="H5::DataSpace::ALL")
                  DataSpace file_space,
                  @Const @ByRef(nullValue="H5::DSetMemXferPropList::DEFAULT")
                  DSetMemXferPropList xfer_plist)

write

public void write(@Const
                  Pointer buf,
                  @Const @ByRef
                  DataType mem_type)

write

public void write(@StdString
                  BytePointer buf,
                  @Const @ByRef
                  DataType mem_type,
                  @Const @ByRef(nullValue="H5::DataSpace::ALL")
                  DataSpace mem_space,
                  @Const @ByRef(nullValue="H5::DataSpace::ALL")
                  DataSpace file_space,
                  @Const @ByRef(nullValue="H5::DSetMemXferPropList::DEFAULT")
                  DSetMemXferPropList xfer_plist)

write

public void write(@StdString
                  BytePointer buf,
                  @Const @ByRef
                  DataType mem_type)

write

public void write(@StdString
                  String buf,
                  @Const @ByRef
                  DataType mem_type,
                  @Const @ByRef(nullValue="H5::DataSpace::ALL")
                  DataSpace mem_space,
                  @Const @ByRef(nullValue="H5::DataSpace::ALL")
                  DataSpace file_space,
                  @Const @ByRef(nullValue="H5::DSetMemXferPropList::DEFAULT")
                  DSetMemXferPropList xfer_plist)

write

public void write(@StdString
                  String buf,
                  @Const @ByRef
                  DataType mem_type)

iterateElems

public int iterateElems(Pointer buf,
                        @Const @ByRef
                        DataType type,
                        @Const @ByRef
                        DataSpace space,
                        H5D_operator_t op,
                        Pointer op_data)

iterateElems

public int iterateElems(Pointer buf,
                        @Const @ByRef
                        DataType type,
                        @Const @ByRef
                        DataSpace space,
                        H5D_operator_t op)

fromClass

@StdString
public BytePointer fromClass()

\brief Returns this class name.

Overrides:

fromClass in class IdComponent

put

@ByRef
@Name("operator =")
public DataSet put(@Const @ByRef
                   DataSet original)

getId

@Cast("hid_t")
public long getId()

Overrides:

getId in class H5Object